Figure 2
From: Assembling proteomics data as a prerequisite for the analysis of large scale experiments
The core of the SQL*LIMS™ system and the integrated applications SQL*GT (microtiter plate solution) and Proteomics Solution. In a first step, proteomics studies can be defined by SQL *LIMS™ or SQL*GT for microtiter plates and structured by the Proteomics Workflow Manager. As a result, any experiments get a unique submission and sample identifier. Using the Proteomics DB Objects, gel images (Universal Gel Loader) and mass spectra (Universal Peak Loader) can be assigned to a specific study and evaluated by the Protein Searcher. Moreover, existing identification results from Mascot (.html, .dat), MS-Fit (.html), SEQUEST (.xls), or Lynx (.txt) can be parsed to SQL*LIMS™. Furthermore, experiment specific data can be queried and reported by the program Query Builder.