Synthesis and antibacterial activity against ralstonia solanacearum for novel hydrazone derivatives containing a pyridine moiety

Background Ralstonia solanacearum, one of the most important bacterial diseases on plants, is a devastating, soil-borne plant pathogen with a global distribution and an unusually wide host range. In order to discover new bioactive molecules and pesticides acting on tobacco bacterial wilt, we sought to combine the active structure of hydrazone and pyridine together to design and synthesize a series of novel hydrazone derivatives containing a pyridine moiety. Results A series of hydrazone derivatives containing a pyridine moiety were synthesized. Their structures were characterized by 1 H-NMR, 13 C-NMR, IR, and elemental analysis. The preliminary biological activity tests showed that compound 3e and 3g exhibited more than 80% activity against Ralstonia solanacearum at 500 mg/L, especially compound 3g displayed relatively good activity to reach 57.0% at 200 mg/L. Conclusion A practical synthetic route to hydrazone derivatives containing a pyridine moiety by the reaction of intermediates 2 with different aldehydes in ethanol at room temperature using 2-chloronicotinic acid and 2-amino-5-chloro-3-methylbenzoic acid as start materials is presented. This study suggests that the hydrazone derivatives containing a substituted pyridine ring could inhibit the growth of Ralstonia solanacearum.


Background
Ralstonia solanacearum (R. solanacearum), one of the most important bacterial diseases on plants, is a devastating, soil-borne plant pathogen with a global distribution and an unusually wide host range, which belongs to the b-proteobacteria and is considered as a "species complex". It causes a wilt disease with deadly effects in many important crops, such as in potato, tomato and eggplant firstly described by Smith in 1896 and subsequently in tobacco in 1908 [1][2][3]. Once the plants infected with bacterial wilt, the main symptoms of plants were rapid death, but stems and leaves remained green. Tobacco bacterial wilt, caused by R. solanacearum, is one of the main plant diseases in tobacco production and occurred in the most common and serious form. The high incidence of plant mortality and the lack of effective control methods make R. solanacearum become one of the world's most destructive plant pathogens [4,5].
Controlling of plant bacterial diseases has long been a challenging mission in the agricultural sector. The application of traditional pesticides has not proved much effective and at the same time high residue level or negative impact on the environment were caused. Copper formulation, a commercial bactericide can enhance resistance in host tobacco plant. Despite being useful in the treatment of plants affected by tobacco bacterial wilt, the use of copper formulation for field trial is largely limited due to its phytotoxicity, strong alkali and low mobility. Therefore, the search for new antibacterial agent still remains a daunting task in pesticide science [25]. In order to discover new molecules and pesticide acting on tobacco bacterial wilt, we sought to combine the active structure of hydrazone and pyridine together to design and synthesize a class of novel hydrazone derivatives containing a pyridine moiety. Thus, 2-chloronicotinic acid and 2-amino-5-chloro-3methylbenzoic acid were used as start materials, 11 novel analogues of hydrazones containing pyridine were synthesized. All the compounds were unequivocally characterized by IR, NMR and elemental analysis. The biological activities on R. solanacearum were tested, the results showed that most of the synthesized compounds exhibited antibacterial activity against R. solanacearum to a certain extent, compounds 3e and 3g showed good antibacterial activity at 200 mg/L. especially compounds 3g displayed excellent antibacterial activity (57.0%) at 200 mg/L. To the best of our knowledge, this is the first report on the antibacterial activity of hydrazone derivatives containing a pyridine moiety.

Synthesis
The synthetic route to the title compounds is demon- [1,3]oxazin-4-one 1 were prepared by treatment of 2-chloronicotinic acid with 2-amino-5-chloro-3-methylbenzoic acid using readily available starting materials and a simple procedure as describing in the literature [26]. The further reaction of intermediates 1 with 80% hydrazine hydrate could proceed readily at room temperature to give intermediates 2 [27]. Subsequent treatment of intermediates 2 with different aldehydes in ethanol at room temperature afforded the desired compounds (3a to 3k). The synthetic route in Scheme 1 had several advantages, which included short steps, short reaction times and excellent yields (e.g. the yields for 3b, 3d, 3e and 3j were 93.3%, 96.6%, 96.6% and 93.6%, respectively), especially the mild conditions (room temperature). Additional file shows the structures, yields and elemental analysis data for title compounds in more detail [see Additional file 2].
All the synthesized compounds (3a-3k) were characterized on the basis of their spectroscopic data. The IR absorption bands near 3260-3180 cm -1 , 3100-2910 cm -1 , 1666-1610 cm -1 , 1600-1575 cm -1 and 1367-1352 cm -1 confirmed the presence of two N-H, Ar-H, amide [28], -C = N- [29] and -CH3 functional groups, respectively.  In the 1 H-NMR spectra of the title compounds, the -CONHAr proton appeared as a broad singlet at 12.17-10.53; the -CONHN proton appeared as a broad singlet at 10.34-10.17; the -C = NH proton mainly appeared as a broad singlet at 8.73-8.20; the pyridine ring of 4 and 6 positions protons were occurred double-double peaks near 8.52-8.51 and 8.01-7.94; the methyl (Ar-CH 3 ) proton signals were observed as a singlet near 2.34-2.30. Meanwhile, we observed the titles compounds possess E and Z configuration in the 1 H-NMR spectra, but the E configuration was mainly forms by the spectra analysis, such as E configuration of -CONHAr proton appeared at 12.11, but Z proton was occurred at 12.01 in 3e, and the E/Z is approximately equal to 3.60.

Biological activity and structure-activity relationship
The antibacterial activity of compounds 3a-3k against R. solanacearum was assayed by the reported method [30]. Kocide, one of the proven commercial agents for controlling R. solanacearum, was used as the reference of bactericides. The results provided in Table 1 indicate that most of the prepared compounds have weak to good antibacterial activity against R. solanacearum at 500 mg/L. Compounds 3e and 3g displayed higher activities than compounds 3a-3d, 3f to 3h-3k at 500 mg/L. For example, inhibition of 3e (R 2 = 3-trifluoromethylphenyl) and 3g (R 2 = N, N-dimethylamino) on tobacco bacterial wilt was 80.9% and 100.0% at 500 mg/L, whereas 3a (R 2 = Et), 3b (R 2 = 2-chlorophenyl) and 3f(R = 4-tert-butylphenyl) was only 5.0%, 6.0% and 39.0% at the same condition. Primary structure-activity relationships revealed that when the CONHN = CHR 2 was simultaneously substituted by N, N-dimethylamino (at the R 2 group) and 3-trifluoromethylphenyl (at the R 2 group), the activity on R. solanacearum increased. However, the introduction of CH 2 CH 3 , 2-chlorophenyl, 4-fluorophenyl, 2,6-dichlorophenyl, 4-tertbutylphenyl, 3, 4-dichlorophenyl, 2, 3-dimethoxyphenyl, 2, 4-dimethoxyphenyl and 2, 5-dimethoxy-phenyl groups into R 2 groups decreased the activity of the compound. Furthermore, the mono-substituent at the different positions on phenyl of the R 2 group also affected the bioactivity of the compound. For instance, the compound with trifluromethyl group at 3-position on phenyl ring (3e) displayed good activity, while the compounds with tert-butyl at 4-position on phenyl ring (3f) exhibited moderate activity and the compound with chlorine at 2-position on phenyl ring (3b) and the compound with fluorine at 4-position on phenyl ring (3c) showed no antibacterial activities on R. solanacearum. Compared with the same substituents on phenyl, the substituents at the 2, 3-positions, the corresponding molecules always had higher inhibition rates for tobacco bacterial wilt. For example, the inhibition rates of 3i (R 2 = 2, 3-dimethoxyphenyl) and 3k (R 2 = 2,4-dimethoxyphenyl) was 40.3%, 36.1% and the inhibition rates of 3j (R 2 = 2,5-dimethoxyphenyl) on tobacco bacterial wilt was 25.2%.

Experimental Chemistry
Unless otherwise stated, all the reagents and reactants were purchased from commercial suppliers; melting points were uncorrected and determined on a XT-4 binocular microscope (Beijing Tech Instrument Co., China). The 1 H-NMR and 13 C-NMR spectra were recorded on a JEOL ECX 500 NMR spectrometer (JEOL Ltd., Japan) at room temperature operating at 500 MHz for 1 H-NMR and 125 MHz for 13 C-NMR by using CDCl 3 or DMSO as solvents and TMS as an internal standard; infrared spectra were recorded in KBr on a IR Pristige-21 spectrometer (Shimadzu corporation, Japan); elemental analysis was performed on an Elemental Vario-III CHN analyzer (Elementar, German). The course of the reactions was monitored by TLC; analytical TLC was performed on silica gel GF 254.
Intermediate 1 and 2 were prepared according to the reported methods [26,27] and used without further purifications [Additional file 3].

Antibacterial biological assay
Antibacterial activities of some title compounds against R. solanacearum were evaluated by the turbidimeter test [30], whereas Kocide ® 3000 was the positive control. The compounds were dissolved in 30 μL DMSO and diluted with water containing TWEEN-20 (0.1 mg/L) to generate a final concentration of 500 mg/L and 200 mg/L, which were added to the toxic nutrient broth (NB) liquid medium in 5 mL tubes, respectively. To the above tubes, 40 μL NB liquid medium containing R. solanacearum pathogen was individually added, then shaken at 30°C and 180 r.p.m. for 48 h, the relative inhibition rate of the circle mycelium

Conclusion
In conclusion, a series of the novel hydrazone derivatives containing a substituted pyridine ring were designed and synthesized. The reaction of intermediates 2 with different aldehydes in ethanol at room temperature used 2-chloronicotinic acid and 2-amino-5-chloro-3-methylbenzoic acid as start materials provides a ready access to a series of the novel hydrazone derivatives containing pyridine moiety. The antibacterial tests indicated that some of the synthesized compounds possessed of moderately high activity against R. solanacearum. The title compounds 3e and 3g exhibited favourable activity against tobacco bacterial wilts in vitro compared to the commercial bactericides Kocide 3000. The antibacterial tests showed that when the R 2 group of CONHN = CHR 2 was 3-trifluoromethylphenyl or N, N-dimethylamino, the corresponding compounds presented good antibacterial activities. The structure of the target products needs to be optimized to enhance their antibacterial activity. Future structural modification and biological evaluation should be carried out to explore the full potential of this novel class of antibacterial molecules.

Additional material
Additional file 1: Synthetic route to target compounds 3a-k. Synthetic sequence to the novel hydrazone analogues 3 containing pyridine ring from 1 and 2.
Additional file 2: Yield and elemental analyses data for title compounds 3a-k. Which contains the a table about structure, yield and elemental analyses data for title compounds 3a-k.
Additional file 3: Experimental details and data of title compounds 3a-k. Which includes the experimental procedure, spectroscopic data of intermediate 1, intermediate 2, title compounds 3a-k, copies of 1 H NMR and 13 C NMR.